Research Papers

2012Using an individual-based model with four trophic levels to model the effect of predation and competition on squid recruitment Sinerchia, M., Field, A.J., Woods, J.D., Vallerga, S. and Hinsley, W.R. ICFES Journal of Marine Science, 69: 439-447
2007Creating individual-based models of the Plankton Ecosystem. Hinsley, W.R., Field, A.J. and Woods, J.D. Int. Conf. on Computational Science, Lectures in Computer Science, Vol. 4487, 111-118, Springer, ISBN 978-3-540-72583-1.
2006Phytoplankton co-existence: Results of individual-based simulation model. Nogueira, E., Woods, J.D., Harris, C., Field, A.J. and Talbot S. Ecological Modelling, 1298, 1-22.
2005The Lagrangian Ensemble metamodel for simulating plankton ecosystems. Woods, J.D. Progress in Oceanography 67, 84-159.
2005Stabilty and predictability of a Virtual Plankton Ecosystem created by an individual-based model. Woods, J.D., Perilli, A. and Barkmann, W. Progress in Oceanography 67, 43-83.
2004Prediction of ocean colour: Monte Carlo simulation applied to a virtual plankton ecosystem based on the Lagrangian Ensemble method. Liu, C.-C and Woods, J.D. Journal of Remote Sensing, 25 (5) 921-936
2004Deriving four parameters from patchy observations of ocean colour for testing a plankton ecosystem model. Liu, C.-C and Woods, J.D. Deep Sea Research, II
2003Primitive equation modeling of plankton ecosystems. Woods, J.D. In N.Pinardi and J.D.Woods (Eds) Ocean Modeling, Chapter 18: Conceptual basis and applications. Springer Verlag, Berlin, 472 pp.
2001Laminar flow in Ocean Ekman Layer. Woods, J.D. In R. Pierce (Ed.) Meteorology at the Millenium, Academic Press, London, 204 pp.
1999Understanding the ecology of plankton. Virtual Ecology. Woods, J.D. In B.J.Mason (Ed) Highlights in environmental research Imperial College Press, London, 1-18.
1998Optical models for use in oceanic ecosystem models. Liu, C.-C, Woods, J.D. et al. Applied Optics, 38 (21), 4475-4485.
1998Coupling of an individual-based population dynamic model of Calanus finmarchicus to a circulation model of the Georges Bank region. Miller, C., Lynch, D.R.. Carlotti, F., Gentleman, W. and Lewis, C.V.W. Fisheries Oceanography, 7, 219-234.
1998A Lagrangian Ensemble model of Calanus finmarchicus coupled with a 1-D ecosystem model. Carlotti, F. and Wolf, U. Fisheries Oceanography, 7, 191-204.
1996On using a Lagrangian model to calibrate primary production determined from in vitro incubation measurements. Barkmann, W. and Woods, J.D. Journal of Plankton Research 18, 767-788.
1995Modeling oligotrophic zooplankton production: Seasonal oligotrophy off the Azores. Woods, J.D. and Barkmann, W. ICES Journal of Marne Science 152, 723-734.
1995Net primary production and stratification in the ocean. Platt, T., Woods, J.D., Sathyendranath, S. and Barkmann, W. In O.M. Johannessen, R.D. Muench and J.E.Overland (Eds) The Polar Oceans and their role in shaping global climate. American Geophysical Union, 85, 247-254.
1994Simulating the plankton ecosystem by the Lagrangian Ensemble method. Woods, J.D. and Barkmann, W. Phil. Trans. of the R. Society B, 343, 27-31.
1993The Plankton multiplier - Positive feedback in the greenhouse. Woods, J.D. and Barkmann, W. Journal of Plankton Research 15(9), 1053-1074.
1993Diatom demography in winter. Woods, J.D. and Barkmann, W. Fisheries Oceanography, 2, 202-222.
1988Mesoscale upwelling and primary production. Woods, J.D. In B. Rothschild (Ed) Towards a theory on biological and physical interaction in the world ocean (pp. 7-38).
1988Lagrangian simulation of primary production in the physical environment - The deep chlorophyll maxumum and nutricline. Wolf, U. and Woods, J.D. In B. Rothschild (Ed) Towards a theory on biological and physical interaction in the world ocean (pp. 51-70).
1986The response of the upper ocean to solar heating: I. The mixed layer. Woods, J.D.and Barkmann, W. Quarterly Journal of the R. Meteorological Society, 112(471), 1-27.
1986The response of the upper ocean to solar heating: II. The wind-driven current. Woods, J.D.and Strauss V. Quarterly Journal of the R. Meteorological Society, 112(471), 29-42.
1985A Lagrangian mixed layer model of 18oC water formation in the Sargasso Sea. Woods, J.D.and Barkmann, W. Nature, 319, 574-576.
1984Solar heating of the world ocean. Woods, J.D., Barkmann, W. and Horch, A. Quarterly Journal of the R. Meteorological Society, 110(465), 633-656.
1982Diurnal variation and primary production din the ocean. Preliminary results of a Lagrangian Ensemble model. Woods, J.D. and Onken, R. Journal of Plankton Research 4, 735-756.
1968Wave-induced shear instability in the summer thermocline. Woods, J.D. Journal of Fluid Mechanics 32(4), 791-800.